Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | ALQ79_02238 | Not Available | Positive | 1846757 - 1847365 | 21972.0 |
| histidine triad protein | ALQ79_02239 | Not Available | Negative | 1847634 - 1848065 | 16406.6 |
| porin d | ALQ79_100311 | Not Available | Positive | 1848887 - 1850275 | 49601.4 |
| prolyl-trna synthetase | ALQ79_100167 | Not Available | Positive | 1850366 - 1852162 | 66194.4 |
| putative lipoprotein | ALQ79_02240 | Not Available | Positive | 1852233 - 1853189 | 35908.4 |
| dna polymerase iv | ALQ79_02241 | Not Available | Negative | 1853229 - 1854314 | 40074.1 |
| Trna-met | Not Available | Not Available | Positive | 1854550 - 1854626 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 1854857 - 1854933 | Not Available |
| hypothetical protein | ALQ79_02242 | Not Available | Positive | 1855280 - 1857925 | 96629.1 |
| hypothetical protein | ALQ79_02243 | Not Available | Positive | 1857925 - 1859259 | 48156.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







