Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolq | ALQ79_02232 | Not Available | Negative | 1838513 - 1839208 | 25299.3 |
| protein ybgc | ALQ79_02233 | Not Available | Negative | 1839198 - 1839665 | 17584.8 |
| holliday junction atp-dependent dna helicase ruvb | ALQ79_05025 | Not Available | Negative | 1839799 - 1840860 | 39058.1 |
| holliday junction atp-dependent dna helicase ruva | ALQ79_100024 | Not Available | Negative | 1840861 - 1841469 | 22154.9 |
| crossover junction endodeoxyribonuclease ruvc | ALQ79_02235 | Not Available | Negative | 1841557 - 1842081 | 18444.7 |
| putative transcriptional regulatory protein | ALQ79_02236 | Not Available | Negative | 1842212 - 1842958 | 26553.1 |
| aspartate--trna ligase | ALQ79_05027 | Not Available | Negative | 1843075 - 1844850 | 66343.4 |
| hypothetical protein | ALQ79_102342 | Not Available | Positive | 1845113 - 1845229 | 4387.29 |
| hypothetical protein | ALQ79_101471 | Not Available | Positive | 1845605 - 1845784 | 6440.87 |
| dna-binding stress protein, dps family | ALQ79_02237 | Not Available | Negative | 1845825 - 1846298 | 17774.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







