Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase fims | ALQ79_01811 | Not Available | Positive | 1809776 - 1810858 | 40105.5 |
| alginate biosynthesis regulatory protein algr | ALQ79_01812 | Not Available | Positive | 1810855 - 1811601 | 27881.9 |
| hypothetical protein | ALQ79_101747 | Not Available | Negative | 1811639 - 1811761 | 4347.18 |
| porphobilinogen deaminase | ALQ79_01813 | Not Available | Positive | 1811834 - 1812775 | 33455.2 |
| putative uroporphyrin-iii c-methyltransferase | ALQ79_04914 | Not Available | Positive | 1813473 - 1814720 | 45743.1 |
| hemy protein | ALQ79_04915 | Not Available | Positive | 1814717 - 1815961 | 46608.2 |
| disulfide bond formation protein b | ALQ79_01816 | Not Available | Positive | 1816178 - 1816705 | 19306.0 |
| regulator of rna polymerase sigma subunit, rsd/algq | ALQ79_01817 | Not Available | Positive | 1816853 - 1817353 | 18807.1 |
| peptidyl-prolyl cis-trans isomerase | ALQ79_04916 | Not Available | Negative | 1817434 - 1818219 | 28127.7 |
| alginate regulatory protein algp | ALQ79_01819 | Not Available | Positive | 1818331 - 1819206 | 29039.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







