Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| emrb/qaca family drug resistance transporter | ALQ79_00980 | Not Available | Positive | 1797502 - 1798914 | 50063.0 |
| putative sensory box-containing diguanylate cye | ALQ79_00981 | Not Available | Positive | 1799159 - 1801858 | 100924.0 |
| peptide methionine sulfoxide reductase msra | ALQ79_00982 | Not Available | Positive | 1802006 - 1802653 | 23346.7 |
| ribosomal rna large subunit methyltransferase j | ALQ79_00983 | Not Available | Negative | 1802935 - 1803771 | 31780.5 |
| hypothetical protein | ALQ79_00984 | Not Available | Positive | 1804151 - 1804381 | 8531.4 |
| hypothetical protein | ALQ79_100143 | Not Available | Positive | 1804418 - 1804771 | 12462.0 |
| oxidoreductase | ALQ79_04713 | Not Available | Negative | 1805009 - 1806109 | 40449.6 |
| hypothetical protein | ALQ79_101729 | Not Available | Positive | 1806101 - 1806274 | 6123.45 |
| rieske region | ALQ79_00986 | Not Available | Positive | 1806419 - 1807717 | 49110.7 |
| argininosuccinate lyase | ALQ79_01810 | Not Available | Negative | 1808248 - 1809642 | 51832.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







