Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 29255 - 29331 | Not Available |
| transcriptional regulator, merr family | ALQ79_01763 | Not Available | Negative | 29420 - 29776 | 13933.0 |
| integration host factor subunit alpha | ALQ79_100087 | Not Available | Negative | 29757 - 30059 | 11476.8 |
| phenylalanine--trna ligase beta subunit | ALQ79_01764 | Not Available | Negative | 30063 - 32441 | 86635.9 |
| phenylalanine--trna ligase alpha subunit | ALQ79_01765 | Not Available | Negative | 32470 - 33486 | 38186.9 |
| 50s ribosomal protein l20 | ALQ79_01766 | Not Available | Negative | 33591 - 33947 | 13314.6 |
| 50s ribosomal protein l35 | ALQ79_100058 | Not Available | Negative | 33977 - 34171 | 7368.38 |
| translation initiation factor if-3 | ALQ79_04895 | Not Available | Negative | 34232 - 34831 | 22594.7 |
| threonyl-trna synthetase | ALQ79_04896 | Not Available | Negative | 34783 - 36738 | 73797.2 |
| hypothetical protein | ALQ79_01769 | Not Available | Positive | 37066 - 37371 | 10778.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







