Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin, 4fe-4s | ALQ79_00970 | Not Available | Positive | 1788185 - 1788436 | 9406.11 |
| hypothetical protein | ALQ79_00971 | Not Available | Negative | 1788445 - 1788807 | 12169.2 |
| formamidopyrimidine-dna glycosylase | ALQ79_04708 | Not Available | Negative | 1788882 - 1789694 | 30251.8 |
| hypothetical protein | ALQ79_00973 | Not Available | Negative | 1789740 - 1790606 | 31883.0 |
| protease pfpi | ALQ79_00974 | Not Available | Positive | 1790791 - 1791330 | 19086.6 |
| hypothetical protein | ALQ79_00975 | Not Available | Positive | 1791412 - 1792608 | 43864.1 |
| trax protein | ALQ79_00976 | Not Available | Negative | 1792712 - 1793458 | 27786.2 |
| threonine aldolase | ALQ79_04710 | Not Available | Positive | 1793366 - 1794598 | 45327.7 |
| tldd/pmba protein | ALQ79_00978 | Not Available | Positive | 1794725 - 1796167 | 51842.1 |
| zn-dependent protease | ALQ79_00979 | Not Available | Positive | 1796167 - 1797492 | 48693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







