Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_00955 | Not Available | Negative | 1769924 - 1771303 | 49954.8 |
| dihydrofolate reductase | ALQ79_00956 | Not Available | Positive | 1771413 - 1771925 | 18821.4 |
| hypothetical protein | ALQ79_00957 | Not Available | Positive | 1772116 - 1773174 | 39474.6 |
| trna -methyltransferase | ALQ79_00958 | Not Available | Negative | 1773227 - 1773964 | 27556.1 |
| thiazole synthase | ALQ79_00959 | Not Available | Negative | 1773972 - 1774766 | 28294.7 |
| thiamine biosynthesis protein this | ALQ79_00960 | Not Available | Negative | 1774819 - 1775019 | 6997.36 |
| putative small membrane protein | ALQ79_00961 | Not Available | Negative | 1775132 - 1775512 | 13258.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | ALQ79_100343 | Not Available | Positive | 1775524 - 1776303 | 29456.2 |
| rna polymerase sigma factor rpoh | ALQ79_100008 | Not Available | Negative | 1776406 - 1777308 | 34321.8 |
| cell division protein ftsx | ALQ79_100713 | Not Available | Negative | 1777378 - 1778412 | 37262.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







