Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_00948 | Not Available | Positive | 1759688 - 1760191 | 18647.3 |
| glutathione s-transferase | ALQ79_101245 | Not Available | Negative | 1760394 - 1761023 | 23613.2 |
| hypothetical protein | ALQ79_00949 | Not Available | Negative | 1761093 - 1761275 | 6458.16 |
| hypothetical protein | ALQ79_00950 | Not Available | Negative | 1761272 - 1762405 | 41669.9 |
| transmembrane sensor | ALQ79_100080 | Not Available | Negative | 1762527 - 1763510 | 35799.9 |
| rna polymerase sigma factor | ALQ79_00951 | Not Available | Negative | 1763507 - 1764025 | 19438.5 |
| choline dehydrogenase | ALQ79_04703 | Not Available | Negative | 1764217 - 1765947 | 63561.3 |
| hypothetical protein | ALQ79_100761 | Not Available | Positive | 1765912 - 1766067 | 5707.98 |
| putative p-dependent betaine aldehyde dehydrogenase | ALQ79_04705 | Not Available | Negative | 1766064 - 1767551 | 53756.0 |
| hypothetical protein | ALQ79_00954 | Not Available | Negative | 1768543 - 1769931 | 50677.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







