Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | ALQ79_01561 | Not Available | Positive | 1737378 - 1738250 | 31473.2 |
| Trna-gln | Not Available | Not Available | Positive | 1738288 - 1738362 | Not Available |
| ribose-phosphate pyrophosphokinase | ALQ79_01562 | Not Available | Positive | 1738408 - 1739349 | 34150.3 |
| 50s ribosomal protein l25 | ALQ79_01563 | Not Available | Positive | 1739474 - 1740085 | 21872.3 |
| peptidyl-trna hydrolase | ALQ79_01564 | Not Available | Positive | 1740250 - 1740834 | 20966.3 |
| ribosome-binding atpase ychf | ALQ79_01565 | Not Available | Positive | 1740856 - 1741956 | 40026.1 |
| dtdp-glucose 4,6-dehydratase | ALQ79_01566 | Not Available | Positive | 1742306 - 1743334 | 38937.3 |
| dtdp-4-dehydrorhamnose reductase | ALQ79_01567 | Not Available | Positive | 1743334 - 1744239 | 32802.1 |
| glucose-1-phosphate thymidylyltransferase | ALQ79_01568 | Not Available | Positive | 1744236 - 1745126 | 32697.1 |
| hypothetical protein | ALQ79_200436 | Not Available | Positive | 1746303 - 1746677 | 13540.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







