Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | ALQ79_01506 | Not Available | Negative | 1716554 - 1717738 | 40088.6 |
| rard protein | ALQ79_01507 | Not Available | Positive | 1717930 - 1718814 | 32952.7 |
| putative atpase | ALQ79_01508 | Not Available | Negative | 1718818 - 1719942 | 42445.1 |
| sulfate permease protein | ALQ79_04848 | Not Available | Negative | 1719984 - 1721429 | 51355.8 |
| beta-lactamase/d-alanine carboxypeptidase | ALQ79_01509 | Not Available | Positive | 1721574 - 1722731 | 42113.4 |
| ada regulatory protein | ALQ79_101881 | Not Available | Negative | 1722720 - 1723826 | 39742.4 |
| dna-3-methyladenine glycosylase 1 | ALQ79_01510 | Not Available | Negative | 1723897 - 1724511 | 22677.8 |
| hypothetical protein | ALQ79_01511 | Not Available | Positive | 1724825 - 1725679 | 30386.8 |
| periplasmic lipoprotein | ALQ79_01512 | Not Available | Positive | 1725688 - 1726899 | 43238.4 |
| dyp-type peroxidase protein | ALQ79_01513 | Not Available | Positive | 1726924 - 1728246 | 47750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







