Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_04570 | Not Available | Negative | 19268 - 20464 | 43700.7 |
| hypothetical protein | ALQ79_00381 | Not Available | Negative | 20521 - 20814 | 10859.5 |
| sugar transporter | ALQ79_00382 | Not Available | Negative | 20933 - 21925 | 36371.9 |
| major facilitator family transporter | ALQ79_00383 | Not Available | Negative | 21961 - 23274 | 47933.9 |
| dihydroxy-acid dehydratase | ALQ79_00384 | Not Available | Positive | 23489 - 25231 | 62240.0 |
| transcriptional regulator of the arabinose operon in shewanella | ALQ79_100475 | Not Available | Positive | 25274 - 26038 | 28414.3 |
| hypothetical protein | ALQ79_00385 | Not Available | Positive | 26351 - 26953 | 21747.9 |
| hypothetical protein | ALQ79_102082 | Not Available | Positive | 26959 - 27657 | 26082.0 |
| hypothetical protein | ALQ79_01761 | Not Available | Positive | 27669 - 28120 | 16308.2 |
| phage integrase | ALQ79_01762 | Not Available | Positive | 27988 - 29172 | 45171.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







