Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetase | ALQ79_04838 | Not Available | Negative | 1674637 - 1675977 | 48013.1 |
| homogentisate 1,2-dioxygenase | ALQ79_01471 | Not Available | Negative | 1675929 - 1677236 | 48440.5 |
| iclr family transcriptional regulator | ALQ79_01472 | Not Available | Positive | 1677375 - 1678166 | 27844.7 |
| ggdef domain-containing protein | ALQ79_04840 | Not Available | Negative | 1678168 - 1679808 | 59857.6 |
| hypothetical protein | ALQ79_100744 | Not Available | Positive | 1679962 - 1680099 | 5092.98 |
| sensory box/ggdef protein | ALQ79_01474 | Not Available | Positive | 1680096 - 1682294 | 81746.4 |
| 4-hydroxyphenylpyruvate dioxygenase | ALQ79_01475 | Not Available | Negative | 1682353 - 1683429 | 40217.2 |
| maleylacetoacetate isomerase | ALQ79_01476 | Not Available | Negative | 1683574 - 1684209 | 23524.3 |
| glycolate oxidase subunit glcd | ALQ79_01477 | Not Available | Positive | 1684270 - 1685868 | 57312.5 |
| glycolate oxidase fad binding subunit | ALQ79_01478 | Not Available | Positive | 1685868 - 1686926 | 38051.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







