Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | ALQ79_04827 | Not Available | Negative | 1611222 - 1612298 | 39051.0 |
| iolh protein | ALQ79_01418 | Not Available | Negative | 1612308 - 1613168 | 33189.3 |
| inositol 2-dehydrogenase | ALQ79_01419 | Not Available | Negative | 1613220 - 1614236 | 36842.4 |
| epi-inositol hydrolase | ALQ79_04828 | Not Available | Negative | 1614298 - 1616235 | 70200.7 |
| ioll protein | ALQ79_01421 | Not Available | Negative | 1616294 - 1617124 | 30008.0 |
| methylmalonate-semialdehyde dehydrogenase | ALQ79_01422 | Not Available | Negative | 1617160 - 1618662 | 53818.9 |
| iolb protein | ALQ79_01423 | Not Available | Negative | 1618691 - 1619500 | 29752.0 |
| ap endonuclease | ALQ79_01424 | Not Available | Negative | 1619514 - 1620419 | 33098.5 |
| carbohydrate kinase, pfkb | ALQ79_04829 | Not Available | Negative | 1620466 - 1622427 | 72328.7 |
| sis domain protein | ALQ79_01426 | Not Available | Positive | 1622690 - 1623604 | 34221.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







