Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium efflux system protein phag | ALQ79_01408 | Not Available | Positive | 1601272 - 1601652 | 13202.4 |
| hypothetical protein | ALQ79_01409 | Not Available | Negative | 1601672 - 1602139 | 17179.9 |
| hypothetical protein | ALQ79_01410 | Not Available | Positive | 1602585 - 1602824 | 9109.55 |
| hypothetical protein | ALQ79_01411 | Not Available | Negative | 1602844 - 1604328 | 54572.9 |
| methyl-accepting chemotaxis protein | ALQ79_04825 | Not Available | Negative | 1604612 - 1606216 | 57989.9 |
| rna polymerase-binding protein dksa | ALQ79_01413 | Not Available | Negative | 1606393 - 1606797 | 15460.3 |
| sugar abc transporter permease | ALQ79_01414 | Not Available | Negative | 1607102 - 1608127 | 35614.6 |
| sugar abc transporter atp-binding protein | ALQ79_01415 | Not Available | Negative | 1608175 - 1609758 | 57759.5 |
| sugar abc transporter periplasmic sugar-binding protein | ALQ79_01416 | Not Available | Negative | 1609816 - 1610757 | 33474.5 |
| hypothetical protein | ALQ79_100201 | Not Available | Negative | 1610799 - 1610969 | 6229.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







