Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain fatty acid transporter | ALQ79_01390 | Not Available | Positive | 1577207 - 1578631 | 50873.8 |
| antibiotic biosynthesis monooxygenase protein | ALQ79_01391 | Not Available | Negative | 1578635 - 1578961 | 12367.4 |
| hypothetical protein | ALQ79_01392 | Not Available | Negative | 1578958 - 1579692 | 26293.3 |
| d-isomer specific 2-hydroxyacid dehydrogenase protein | ALQ79_01393 | Not Available | Negative | 1579803 - 1580801 | 35047.2 |
| glycerophosphoryl diester phosphodiesterase | ALQ79_01394 | Not Available | Positive | 1580994 - 1582151 | 42107.4 |
| tonb-dependent siderophore receptor | ALQ79_01395 | Not Available | Negative | 1582196 - 1584382 | 78485.6 |
| phosphatidylserine synthase | ALQ79_01396 | Not Available | Positive | 1584631 - 1585974 | 50869.1 |
| atp-dependent dna ligase | ALQ79_04823 | Not Available | Negative | 1586037 - 1588661 | 96343.2 |
| non--like proteinous end joining protein ku | ALQ79_01398 | Not Available | Negative | 1588658 - 1589563 | 33601.2 |
| hypothetical protein | ALQ79_101414 | Not Available | Positive | 1589591 - 1589719 | 5016.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







