Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, group 1 protein | ALQ79_01382 | Not Available | Positive | 1567542 - 1568666 | 41428.9 |
| mannosyltransferase | ALQ79_01383 | Not Available | Positive | 1568740 - 1569969 | 44806.4 |
| capsular polysaccharide biosynthesis protein | ALQ79_01384 | Not Available | Positive | 1569983 - 1571392 | 53267.3 |
| capsular polysaccharide biosynthesis protein | ALQ79_01385 | Not Available | Positive | 1571405 - 1572562 | 42379.4 |
| putative proteinh-dependent fmn reductase | ALQ79_01386 | Not Available | Positive | 1572813 - 1573394 | 21113.5 |
| amino acid transporter lyse | ALQ79_01387 | Not Available | Negative | 1573402 - 1574010 | 21943.4 |
| putative lipoprotein | ALQ79_04819 | Not Available | Negative | 1574134 - 1574415 | 10282.0 |
| lysr family transcriptional regulator | ALQ79_01388 | Not Available | Negative | 1574505 - 1575395 | 32564.8 |
| 3-oxoacid coa-transferase | ALQ79_100009 | Not Available | Positive | 1575441 - 1576226 | 28625.7 |
| 3-oxoadipate coa-succinyl transferase, subunit beta | ALQ79_01389 | Not Available | Positive | 1576268 - 1576924 | 23134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







