Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-containing alcohol dehydrogenase | ALQ79_03878 | Not Available | Positive | 1532695 - 1533864 | 41903.0 |
| type iii effector hrp-dependent outer | ALQ79_03879 | Not Available | Positive | 1533861 - 1535120 | 44685.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | ALQ79_03880 | Not Available | Positive | 1535113 - 1536147 | 36863.8 |
| sodium/solute symporter | ALQ79_03881 | Not Available | Positive | 1536226 - 1537641 | 50658.0 |
| bnr/asp-box repeat protein | ALQ79_100409 | Not Available | Positive | 1537565 - 1538752 | 43966.6 |
| short chain dehydrogenase/reductase family oxidoreductase | ALQ79_03882 | Not Available | Positive | 1538807 - 1539499 | 24062.3 |
| deor family transcriptional regulator | ALQ79_03883 | Not Available | Positive | 1539539 - 1540309 | 27714.3 |
| hypothetical protein | ALQ79_101644 | Not Available | Negative | 1540263 - 1540427 | 5966.31 |
| putative membrane protein | ALQ79_03884 | Not Available | Positive | 1540603 - 1544001 | 126845.0 |
| penicillin amidase protein | ALQ79_04629 | Not Available | Negative | 1544251 - 1546791 | 92346.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







