Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial transferase hexapeptide repeat protein | ALQ79_03868 | Not Available | Negative | 1520657 - 1521298 | 22246.8 |
| gluconate 5-dehydrogenase | ALQ79_03869 | Not Available | Negative | 1521295 - 1522140 | 30032.4 |
| hypothetical protein | ALQ79_03870 | Not Available | Negative | 1522109 - 1522318 | 7487.88 |
| sensor histidine kinase | ALQ79_03871 | Not Available | Negative | 1522594 - 1523289 | 25277.3 |
| response regulator/tpr domain-containing protein | ALQ79_03872 | Not Available | Negative | 1523286 - 1524887 | 58530.4 |
| sh3 type 3 domain-containing protein | ALQ79_03873 | Not Available | Negative | 1525255 - 1525929 | 24093.8 |
| decarboxylase protein | ALQ79_03874 | Not Available | Positive | 1526325 - 1527755 | 52876.0 |
| transcriptional regulator pobr | ALQ79_05450 | Not Available | Negative | 1527807 - 1528778 | 37078.5 |
| major facilitator family transporter | ALQ79_03876 | Not Available | Positive | 1530310 - 1531635 | 48073.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ALQ79_03877 | Not Available | Positive | 1531806 - 1532684 | 31231.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







