Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Major capsid | ALQ79_00826 | Not Available | Negative | 6419658 - 6420626 | 34243.5 |
| Hypothetical protein | ALQ79_00827 | Not Available | Negative | 6420639 - 6421433 | 28004.3 |
| Head morphogenesis protein | ALQ79_00828 | Not Available | Negative | 6421465 - 6422514 | 38102.3 |
| Portal protein | ALQ79_00829 | Not Available | Negative | 6422504 - 6423943 | 53053.5 |
| Putative large terminase subunit | ALQ79_100695 | Not Available | Negative | 6423952 - 6425253 | 48967.5 |
| Putative transposase | ALQ79_00830 | Not Available | Negative | 6425734 - 6426357 | 22993.4 |
| Lipoprotein | ALQ79_00831 | Not Available | Negative | 6426915 - 6427097 | 6390.5 |
| hypothetical protein | ALQ79_102324 | Not Available | Negative | 65 - 280 | 8126.28 |
| putative protein-glutamate dehydrogenase | ALQ79_04565 | Not Available | Negative | 303 - 5162 | 182197.0 |
| hypothetical protein | ALQ79_00371 | Not Available | Positive | 5531 - 5890 | 13186.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







