Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ALQ79_03649 | Not Available | Positive | 1461688 - 1462425 | 27374.1 |
| hypothetical protein | ALQ79_03650 | Not Available | Positive | 1463239 - 1464015 | 29336.0 |
| hypothetical protein | ALQ79_03651 | Not Available | Positive | 1464058 - 1465005 | 35918.1 |
| nonribosomal peptide synthetase | ALQ79_03652 | Not Available | Positive | 1465002 - 1468436 | 126481.0 |
| hypothetical protein | ALQ79_03653 | Not Available | Positive | 1468458 - 1468946 | 17189.3 |
| hypothetical protein | ALQ79_00945 | Not Available | Positive | 1469852 - 1470118 | 9212.32 |
| hypothetical protein | ALQ79_101232 | Not Available | Positive | 1470115 - 1470735 | 22427.0 |
| type iii effector hopag1 | ALQ79_01022 | Not Available | Positive | 1471066 - 1471848 | 28163.6 |
| type iii effector hopag1 | ALQ79_01023 | Not Available | Positive | 1471864 - 1473231 | 50702.6 |
| endoglucanase | ALQ79_100577 | Not Available | Positive | 1473277 - 1474623 | 46075.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







