Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyoverdine abc transporter atp-binding/permease protein | ALQ79_00645 | Not Available | Positive | 1436805 - 1438481 | 62316.9 |
| putative tonb-dependent siderophore receptor | ALQ79_00646 | Not Available | Positive | 1438789 - 1441020 | 81224.4 |
| outer membrane ferripyoverdine receptor | ALQ79_00647 | Not Available | Positive | 1441210 - 1443534 | 84673.3 |
| inci1 plasmid conjugative transfer protein traj | ALQ79_02415 | Not Available | Positive | 1443661 - 1444032 | 14234.3 |
| beta-ketoacyl-acyl-carrier-protein synthase i | ALQ79_03635 | Not Available | Positive | 1444309 - 1445316 | 35044.4 |
| putative protein-dependent epimerase/dehydratase | ALQ79_03636 | Not Available | Positive | 1445313 - 1446329 | 37659.6 |
| beta-lactamase domain-containing protein | ALQ79_03637 | Not Available | Positive | 1446322 - 1447128 | 29580.2 |
| putative adenylate-forming enzyme | ALQ79_03638 | Not Available | Positive | 1447125 - 1448408 | 48642.9 |
| hypothetical protein | ALQ79_03639 | Not Available | Positive | 1448438 - 1449025 | 21590.8 |
| c-5 sterol desaturase | ALQ79_100502 | Not Available | Positive | 1449022 - 1450158 | 42743.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







