Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biosynthetic aromatic amino acid aminotransferase alpha aromatic-amino-acid aminotransferase | ALQ79_101041 | Not Available | Positive | 1422414 - 1423253 | 30631.6 |
| hypothetical protein | ALQ79_00636 | Not Available | Positive | 1423489 - 1423812 | 11399.5 |
| penicillin amidase protein | ALQ79_04627 | Not Available | Negative | 1423868 - 1426207 | 84880.3 |
| rnd family efflux transporter mfp subunit | ALQ79_00638 | Not Available | Positive | 1426411 - 1427583 | 41817.1 |
| macrolide export atp-binding/permease protein macb | ALQ79_00639 | Not Available | Positive | 1427584 - 1429554 | 69551.0 |
| nodt family outer membrane efflux lipoprotein | ALQ79_00640 | Not Available | Positive | 1429562 - 1430950 | 50609.7 |
| tat pathway signal sequence domain-containing protein | ALQ79_04628 | Not Available | Negative | 1431335 - 1433035 | 64696.4 |
| renal dipeptidase protein | ALQ79_00642 | Not Available | Positive | 1433153 - 1434547 | 51125.9 |
| aminotransferase, s v | ALQ79_00643 | Not Available | Positive | 1434540 - 1435820 | 47325.7 |
| hypothetical protein | ALQ79_00644 | Not Available | Positive | 1435869 - 1436735 | 31578.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







