Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridine nucleotide-disulfide oxidoreductase protein | ALQ79_02721 | Not Available | Positive | 1397783 - 1399192 | 49934.0 |
| oxidoreductase, fad-binding protein | ALQ79_02722 | Not Available | Positive | 1399189 - 1400343 | 41969.4 |
| acetylornithine deacetylase | ALQ79_02723 | Not Available | Positive | 1400340 - 1401497 | 42102.9 |
| succinic semialdehyde dehydrogenase | ALQ79_02724 | Not Available | Positive | 1401612 - 1403069 | 52101.8 |
| d-3-phosphoglycerate dehydrogenase | ALQ79_100264 | Not Available | Negative | 1403262 - 1404404 | 42188.3 |
| 4-aminobutyrate aminotransferase | ALQ79_02725 | Not Available | Positive | 1404476 - 1405780 | 46634.4 |
| hypothetical protein | ALQ79_02726 | Not Available | Positive | 1405844 - 1406518 | 25303.4 |
| asnc family transcriptional regulator | ALQ79_02727 | Not Available | Positive | 1406566 - 1407054 | 18497.5 |
| hypothetical protein | ALQ79_101446 | Not Available | Negative | 1407273 - 1407443 | 6505.69 |
| methyl-accepting chemotaxis protein | ALQ79_05159 | Not Available | Positive | 1407414 - 1408910 | 53654.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







