Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | ALQ79_03542 | Not Available | Positive | 1375087 - 1376691 | 59127.9 |
| hypothetical protein | ALQ79_05372 | Not Available | Positive | 1377038 - 1378084 | 36494.0 |
| pap2 super protein | ALQ79_03544 | Not Available | Negative | 1378348 - 1379151 | 30785.6 |
| hypothetical protein | ALQ79_02339 | Not Available | Negative | 1379527 - 1379703 | 6750.43 |
| carbohydrate kinase, pfkb | ALQ79_02340 | Not Available | Positive | 1380190 - 1381116 | 32460.8 |
| l-fucose permease | ALQ79_02341 | Not Available | Positive | 1381146 - 1382477 | 48238.2 |
| putative cytoplasmic protein | ALQ79_02342 | Not Available | Positive | 1382474 - 1383544 | 39285.6 |
| regulatory protein, deor | ALQ79_02343 | Not Available | Negative | 1383550 - 1384320 | 28588.4 |
| deoxyribose-phosphate aldolase | ALQ79_02344 | Not Available | Positive | 1384420 - 1385103 | 23226.1 |
| hypothetical protein | ALQ79_02345 | Not Available | Negative | 1385138 - 1385386 | 9225.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







