Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_03508 | Not Available | Positive | 1334663 - 1335610 | 34467.4 |
| putative hydroxycinnamate transporter | ALQ79_05364 | Not Available | Negative | 1335984 - 1337204 | 41650.2 |
| hypothetical protein | ALQ79_100655 | Not Available | Positive | 1337143 - 1337271 | 4683.91 |
| outer membrane porin | ALQ79_03509 | Not Available | Positive | 1337531 - 1338853 | 48103.6 |
| transcriptional regulator, marr family | ALQ79_03510 | Not Available | Negative | 1338898 - 1339386 | 17810.6 |
| 4-hydroxycinnamoyl coa hydratase/lyase | ALQ79_03511 | Not Available | Positive | 1339598 - 1340428 | 31121.6 |
| vanillin dehydrogenase | ALQ79_03512 | Not Available | Positive | 1340513 - 1341967 | 50562.9 |
| feruloyl-coa synthase | ALQ79_05366 | Not Available | Positive | 1342048 - 1344006 | 71605.8 |
| thiolase protein | ALQ79_03514 | Not Available | Positive | 1344003 - 1345247 | 43459.4 |
| hypothetical protein | ALQ79_03515 | Not Available | Positive | 1345387 - 1345731 | 13069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







