Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase, iron-containing | ALQ79_03500 | Not Available | Positive | 1322865 - 1324019 | 41147.5 |
| s c beta-lactamase | ALQ79_101563 | Not Available | Positive | 1324023 - 1325216 | 42738.2 |
| transcriptional regulator, arac family | ALQ79_03501 | Not Available | Negative | 1325176 - 1326129 | 34981.1 |
| thij/pfpi protein | ALQ79_03502 | Not Available | Positive | 1326272 - 1326877 | 22304.4 |
| transcriptional regulator, lysr family | ALQ79_03503 | Not Available | Positive | 1327083 - 1327367 | 10281.4 |
| hypothetical protein | ALQ79_03504 | Not Available | Positive | 1327451 - 1327972 | 19387.7 |
| trehalose synthase | ALQ79_03505 | Not Available | Positive | 1328131 - 1330194 | 75956.5 |
| sigma-54 dependent transcriptional regulator | ALQ79_05363 | Not Available | Negative | 1330191 - 1331984 | 65807.0 |
| benzaldehyde dehydrogenase | ALQ79_03506 | Not Available | Positive | 1332243 - 1333724 | 51689.8 |
| 3-alpha-hydroxysteroid dehydrogenase | ALQ79_03507 | Not Available | Positive | 1333811 - 1334578 | 27727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







