Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_03491 | Not Available | Negative | 1310841 - 1311314 | 17292.9 |
| phage integrase family site specific recombinase | ALQ79_03492 | Not Available | Positive | 1311489 - 1312514 | 39058.8 |
| hypothetical protein | ALQ79_03493 | Not Available | Positive | 1312849 - 1313241 | 14837.4 |
| methionyl-trna synthetase | ALQ79_03494 | Not Available | Positive | 1313234 - 1314733 | 55842.2 |
| oxidoreductase, fad-binding protein | ALQ79_03495 | Not Available | Positive | 1314747 - 1315886 | 40511.8 |
| receptor family ligand binding protein | ALQ79_101737 | Not Available | Positive | 1316273 - 1316860 | 21224.1 |
| lysine n6-hydroxylase/l-ornithine n5-oxygenase protein | ALQ79_03496 | Not Available | Positive | 1316915 - 1318234 | 48916.8 |
| pyridoxal-phosphate dependent enzyme family/ornithine cyclodeaminase protein | ALQ79_03497 | Not Available | Positive | 1318240 - 1320423 | 78465.6 |
| hypothetical protein | ALQ79_03498 | Not Available | Positive | 1320423 - 1322168 | 63903.2 |
| threonine efflux protein | ALQ79_03499 | Not Available | Positive | 1322196 - 1322840 | 22986.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







