Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion protein hrpf | ALQ79_00789 | Not Available | Positive | 1277409 - 1277633 | 7938.05 |
| type iii secretion component protein hrpg | ALQ79_00790 | Not Available | Positive | 1277620 - 1278051 | 15593.6 |
| type iii outer membrane protein hrcc | ALQ79_00791 | Not Available | Positive | 1278053 - 1280164 | 76724.9 |
| type iii negative regulator of hrp expression hrpv | ALQ79_00792 | Not Available | Positive | 1280367 - 1280714 | 13360.9 |
| type iii secretion component protein hrcu | ALQ79_04679 | Not Available | Negative | 1280934 - 1282013 | 39995.5 |
| type iii secretion protein spar/ysct/hrct | ALQ79_00794 | Not Available | Negative | 1282010 - 1282804 | 28349.0 |
| type iii secretion component protein hrcs | ALQ79_00795 | Not Available | Negative | 1282805 - 1283071 | 9407.06 |
| type iii secretion system protein yscr | ALQ79_00796 | Not Available | Negative | 1283079 - 1283732 | 24185.6 |
| type iii secretion protein hrcqb | ALQ79_00797 | Not Available | Negative | 1283729 - 1284118 | 14234.3 |
| type iii secretion protein hrcqa | ALQ79_00798 | Not Available | Negative | 1284108 - 1284824 | 26060.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







