Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii effector avre1 | ALQ79_04678 | Not Available | Negative | 1263698 - 1268887 | 187769.0 |
| lytic murein transglycosylase | ALQ79_04677 | Not Available | Positive | 1269053 - 1270525 | 53859.5 |
| hrpr | ALQ79_00781 | Not Available | Positive | 1271609 - 1272529 | 34227.7 |
| type iii transcriptional regulator hrps | ALQ79_00782 | Not Available | Positive | 1272580 - 1273488 | 33256.3 |
| type iii helper protein hrpa2 | ALQ79_00783 | Not Available | Positive | 1273582 - 1273896 | 11283.2 |
| type iii helper protein hrpz1 | ALQ79_00784 | Not Available | Positive | 1273950 - 1274960 | 34302.1 |
| type iii secretion protein hrpb | ALQ79_00785 | Not Available | Positive | 1274988 - 1275362 | 12835.3 |
| type iii secretion protein hrcj | ALQ79_00786 | Not Available | Positive | 1275371 - 1276180 | 29427.8 |
| hrpd | ALQ79_00787 | Not Available | Positive | 1276177 - 1276707 | 20195.9 |
| type iii secretion protein hrpe | ALQ79_00788 | Not Available | Positive | 1276744 - 1277325 | 21404.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







