Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane efflux protein | ALQ79_04658 | Not Available | Negative | 1199561 - 1201072 | 54652.7 |
| multidrug rnd efflux transporter, permease mdtc | ALQ79_00737 | Not Available | Negative | 1201027 - 1204134 | 112336.0 |
| acriflavin resistance plasma membrane protein | ALQ79_04661 | Not Available | Negative | 1204131 - 1207241 | 111875.0 |
| multidrug rnd efflux transporter, membrane fusion protein mdta | ALQ79_00739 | Not Available | Negative | 1207238 - 1208539 | 46632.1 |
| putative thiol peroxidase | ALQ79_00740 | Not Available | Negative | 1208692 - 1209192 | 17475.8 |
| lysr family transcriptional regulator | ALQ79_00741 | Not Available | Negative | 1209283 - 1210200 | 33628.0 |
| hypothetical protein | ALQ79_04664 | Not Available | Negative | 1210306 - 1213995 | 131660.0 |
| surface antigen | ALQ79_00743 | Not Available | Negative | 1213992 - 1215716 | 63433.0 |
| acetyltransferase | ALQ79_00744 | Not Available | Negative | 1215776 - 1216447 | 25349.4 |
| exonuclease iii | ALQ79_100989 | Not Available | Positive | 1216519 - 1217451 | 35242.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







