Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fatty acid desaturase | ALQ79_00675 | Not Available | Negative | 1121913 - 1123022 | 40975.1 |
| hypothetical protein | ALQ79_00676 | Not Available | Negative | 1123024 - 1123491 | 17689.0 |
| ornithine aminotransferase | ALQ79_00677 | Not Available | Negative | 1123504 - 1124760 | 44171.9 |
| hypothetical protein | ALQ79_00678 | Not Available | Negative | 1124757 - 1125314 | 20334.3 |
| hypothetical protein | ALQ79_00679 | Not Available | Negative | 1125311 - 1126441 | 41570.0 |
| hypothetical protein | ALQ79_101901 | Not Available | Positive | 1126457 - 1126621 | 6037.39 |
| ornithine decarboxylase | ALQ79_00680 | Not Available | Positive | 1126935 - 1128050 | 40945.2 |
| dmt superfamily multiple drug efflux pump | ALQ79_00681 | Not Available | Positive | 1128051 - 1128410 | 12611.0 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | ALQ79_100235 | Not Available | Negative | 1128442 - 1129239 | 29702.6 |
| alkylhydroperoxidase | ALQ79_00682 | Not Available | Negative | 1129360 - 1129947 | 21502.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







