Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation efflux protein | ALQ79_04385 | Not Available | Negative | 1051292 - 1052185 | 31852.0 |
| hypothetical protein | ALQ79_04386 | Not Available | Negative | 1052211 - 1052630 | 14723.0 |
| d-galactose 1-dehydrogenase | ALQ79_04387 | Not Available | Positive | 1052847 - 1053773 | 33689.1 |
| esterase/lipase | ALQ79_100380 | Not Available | Positive | 1053791 - 1054819 | 37419.5 |
| thioredoxon-like super protein | ALQ79_100194 | Not Available | Negative | 1054829 - 1055551 | 26512.8 |
| bcl-2 protein | ALQ79_04388 | Not Available | Negative | 1055709 - 1056410 | 26171.5 |
| endoribonuclease l-psp protein | ALQ79_04389 | Not Available | Positive | 1056572 - 1056955 | 13631.3 |
| type iii effector hopi1 | ALQ79_04390 | Not Available | Positive | 1057079 - 1058089 | 36620.4 |
| atp-dependent helicase hrpb | ALQ79_05584 | Not Available | Positive | 1058099 - 1060696 | 95271.3 |
| hypothetical protein | ALQ79_200282 | Not Available | Positive | 1060729 - 1061307 | 21302.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







