Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ALQ79_101812 | Not Available | Negative | 1039622 - 1039795 | 6449.09 |
| glutamate-1-semialdehyde 2,1-aminomutase | ALQ79_05577 | Not Available | Negative | 1039853 - 1041205 | 47863.5 |
| thiamine-phosphate synthase | ALQ79_04378 | Not Available | Negative | 1041408 - 1042025 | 21939.6 |
| putative phosphomethylpyrimidine kinase | ALQ79_04379 | Not Available | Negative | 1042049 - 1042963 | 32728.4 |
| sensor histidine kinase | ALQ79_05578 | Not Available | Positive | 1043179 - 1045212 | 75447.8 |
| acyl-coa dehydrogenase domain-containing protein | ALQ79_04381 | Not Available | Positive | 1045338 - 1046987 | 59693.3 |
| amp nucleosidase | ALQ79_04382 | Not Available | Positive | 1047040 - 1048503 | 54596.7 |
| pseudouridine synthase | ALQ79_04383 | Not Available | Positive | 1048583 - 1049215 | 23676.5 |
| asnc family transcriptional regulator | ALQ79_05580 | Not Available | Negative | 1049228 - 1049731 | 19049.2 |
| hypothetical protein | ALQ79_05581 | Not Available | Positive | 1049972 - 1051285 | 50397.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







