Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative 3-methyladenine dna glycosylase | ALQ79_04352 | Not Available | Negative | 1012024 - 1012695 | 24990.9 |
| hypothetical protein | ALQ79_05571 | Not Available | Negative | 1012816 - 1013535 | 26184.6 |
| gamma-glutamyl phosphate reductase | ALQ79_04353 | Not Available | Positive | 1013583 - 1014848 | 44873.9 |
| putative nicotinate-nucleotide adenylyltransferase | ALQ79_04354 | Not Available | Positive | 1014823 - 1015530 | 25799.9 |
| ribosomal silencing factor rsfs | ALQ79_04355 | Not Available | Positive | 1015591 - 1015977 | 13928.5 |
| ribosomal rna large subunit methyltransferase h | ALQ79_04356 | Not Available | Positive | 1015987 - 1016454 | 17737.7 |
| penicillin-binding protein 2 | ALQ79_04357 | Not Available | Positive | 1016483 - 1018378 | 70159.3 |
| lytic murein transglycosylase b | ALQ79_04358 | Not Available | Positive | 1019519 - 1020538 | 38069.2 |
| lipoprotein, rlpa family | ALQ79_04359 | Not Available | Positive | 1020538 - 1021566 | 36795.8 |
| hypothetical protein | ALQ79_05572 | Not Available | Positive | 1021648 - 1021791 | 5269.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







