Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas amygdali |
| Strain | pv. lachrymans strain YM8003 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | aerosols; greenhouses |
| Biotic relationship | Not Available |
| Host(s) | Solanum lycopersicum, Oryza sativa, Cucumis sativus |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | cucumber; Plant |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5428 genes
Non-Coding Genes
740 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein ribd | ALQ79_00515 | Not Available | Positive | 968152 - 969288 | 40256.9 |
| riboflavin synthase, alpha subunit | ALQ79_00516 | Not Available | Positive | 969336 - 969998 | 23440.0 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ALQ79_00517 | Not Available | Positive | 970020 - 971111 | 39715.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALQ79_00518 | Not Available | Positive | 971241 - 971717 | 16521.1 |
| n utilization substance protein b -like protein | ALQ79_100111 | Not Available | Positive | 971714 - 972211 | 18621.1 |
| thiamine-monophosphate kinase | ALQ79_00519 | Not Available | Positive | 972228 - 973193 | 33162.8 |
| gtp cyclohydrolase-2 | ALQ79_00520 | Not Available | Positive | 973328 - 973945 | 22089.7 |
| hypothetical protein | ALQ79_00521 | Not Available | Positive | 973942 - 974361 | 15059.1 |
| urease accessory protein | ALQ79_00522 | Not Available | Negative | 974416 - 974988 | 18930.6 |
| urease accessory protein ureg | ALQ79_00523 | Not Available | Negative | 975014 - 975631 | 22027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Angular leaf spot | Causes | PMC7586749 |
| Angular leaf spot | Causes | PMC6960962 |
| Bacterial angular leaf spot | Causes | PMC9343901 |
| Angular leaf spot (als) disease | Causes | PMC9936812 |
| Als disease | Causes | PMC9936812 |
| Angular leaf spot | Causes | PMC9936812 |
| Als | Causes | PMC9936812 |
| Cucumber als disease | Causes | PMC9936812 |







