Pseudomonas savastanoi pv. savastanoi strain ICMP 13519

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a heterotroph, utilizing organic compounds as its energy source, and requires oxygen for its metabolic processes, categorizing it as an aerobe. This strain thrives optimally at 28°C and is considered mesophilic, indicating its preference for moderate temperature ranges. In terms of cellular structure, Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 has a single replicon and features a double membrane system. This bacterium is free-living and has been observed to establish biotic relationships with specific host plants, including Olea europaea (olive), Punica granatum (pomegranate), and Fraxinus excelsior (ash). It is notably associated with the olive knot disease, a condition that affects olive trees, leading to the formation of galls on branches and stems. The ecological significance of Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 lies in its role as a pathogen in agricultural settings, particularly in olive cultivation. The disease it causes can have substantial economic impacts on olive production, thereby influencing agricultural practices and crop management strategies. Understanding the traits and behaviors of this bacterium is crucial for developing effective disease management approaches in horticulture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. savastanoi strain ICMP 13519

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. savastanoi strain ICMP 13519
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Olea europaea, Punica granatum, Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. savastanoi strain ICMP 13519

Gene Summary

Adenine Count

1318396 bp

Thymine Count

1318755 bp

Guanine Count

1815509 bp

Cytosine Count

1812655 bp

Genome Length

6293123 bp

Protein-coding Genes

5811 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proteinral secretion pathway protein aALQ90_02656Not AvailablePositive146477 - 14809055577.0
glutamate synthase large chainALQ90_02657Not AvailablePositive148451 - 152896162345.0
putative lipoproteinALQ90_101328Not AvailablePositive152912 - 1530043274.99
glutamate synthase, small subunitALQ90_02658Not AvailablePositive153019 - 15443751757.0
amidase proteinALQ90_02659Not AvailablePositive154603 - 15615054572.6
hypothetical proteinALQ90_02660Not AvailablePositive156481 - 15901894114.0
hypothetical proteinALQ90_100883Not AvailablePositive158976 - 15969226168.9
hypothetical proteinALQ90_102741Not AvailableNegative159673 - 1598827470.01
uroporphyrinogen decarboxylaseALQ90_02661Not AvailablePositive159835 - 16089938709.6
n-acyl-d-amino acid deacylase proteinALQ90_02662Not AvailableNegative160960 - 16243553080.8

Displaying genes 291 – 300 of 5983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
DiseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Olive knot diseaseCausesPMC8435235
Olive knot diseaseCausesPMC8815115
Olive knot diseaseCausesPMC2901321

Displaying health effects 1 – 6 of 6 in total