Pseudomonas savastanoi pv. savastanoi strain ICMP 13519

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. It is classified as a heterotroph, utilizing organic compounds as its energy source, and requires oxygen for its metabolic processes, categorizing it as an aerobe. This strain thrives optimally at 28°C and is considered mesophilic, indicating its preference for moderate temperature ranges. In terms of cellular structure, Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 has a single replicon and features a double membrane system. This bacterium is free-living and has been observed to establish biotic relationships with specific host plants, including Olea europaea (olive), Punica granatum (pomegranate), and Fraxinus excelsior (ash). It is notably associated with the olive knot disease, a condition that affects olive trees, leading to the formation of galls on branches and stems. The ecological significance of Pseudomonas savastanoi pv. savastanoi strain ICMP 13519 lies in its role as a pathogen in agricultural settings, particularly in olive cultivation. The disease it causes can have substantial economic impacts on olive production, thereby influencing agricultural practices and crop management strategies. Understanding the traits and behaviors of this bacterium is crucial for developing effective disease management approaches in horticulture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas savastanoi
Strainpv. savastanoi strain ICMP 13519

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas savastanoi pv. savastanoi strain ICMP 13519
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature28
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Olea europaea, Punica granatum, Fraxinus excelsior
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas savastanoi pv. savastanoi strain ICMP 13519

Gene Summary

Adenine Count

1318396 bp

Thymine Count

1318755 bp

Guanine Count

1815509 bp

Cytosine Count

1812655 bp

Genome Length

6293123 bp

Protein-coding Genes

5811 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chlorohydrolase/deaminase proteinALQ90_04308Not AvailablePositive14998 - 1635348861.8
cpaa proteinALQ90_05700Not AvailableNegative16465 - 1758940053.3
iron-dicitrate transporter substrate-binding subunitALQ90_04310Not AvailablePositive17730 - 1872835947.5
iron-dicitrate transporter permease subunitALQ90_101879Not AvailablePositive18729 - 1922016654.8
leucine-rich repeat domain proteinALQ90_01853Not AvailablePositive19271 - 2137979513.4
putative acyl-coa n-acyltransferaseALQ90_01854Not AvailablePositive21420 - 2254742664.3
abc transporter, atp-binding/permease proteinALQ90_05071Not AvailableNegative22735 - 2456767825.5
peptidyl-prolyl cis-trans isomeraseALQ90_01856Not AvailableNegative24670 - 2523320232.3
menaquinone biosynthesis related protein menxALQ90_01857Not AvailableNegative25373 - 2616129485.8
lysr family transcriptional regulatorALQ90_100383Not AvailableNegative26175 - 2709833931.7

Displaying genes 161 – 170 of 5983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Olive knotCausesPMC10420344
DiseaseCausesPMC10420344
Olive knot diseaseCausesPMC6638699
Olive knot diseaseCausesPMC8435235
Olive knot diseaseCausesPMC8815115
Olive knot diseaseCausesPMC2901321

Displaying health effects 1 – 6 of 6 in total