Pseudomonas syringae pv. ribicola strain ICMP 3883

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. ribicola strain ICMP 3883 is a notable bacterial pathogen primarily associated with ribes plants. This strain is characterized by having a single replicon, which is significant for its genetic stability and replication processes. The strain has been assigned the accession number RBNR00000000.1, indicating it is cataloged in genomic databases for reference and further studies. As a member of the Pseudomonas syringae species, this pathogen plays a critical role in plant pathology, particularly affecting agricultural crops. Its interactions with host plants can lead to significant economic impacts due to crop loss and the necessity for management strategies to mitigate disease spread. In an ecological context, Pseudomonas syringae pv. ribicola strain ICMP 3883 contributes to the complex dynamics of plant-microbe interactions. Understanding its genetic and pathogenic traits can provide insights into how bacterial pathogens adapt to their hosts and the environmental factors influencing these relationships. This knowledge is essential for developing effective disease management practices in agriculture and enhancing crop resilience against bacterial infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae group genomosp. 3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas syringae pv. ribicola strain ICMP 3883
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. ribicola strain ICMP 3883

Gene Summary

Adenine Count

1263769 bp

Thymine Count

1275368 bp

Guanine Count

1800957 bp

Cytosine Count

1793119 bp

Genome Length

6156903 bp

Protein-coding Genes

5393 genes

Non-Coding Genes

136 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinALQ95_101998Not AvailablePositive3829945 - 38300584262.24
type iv pilus bioproteinsis protein pilzALQ95_02920Not AvailableNegative3830010 - 383036612832.6
dna polymerase iii subunit deltaALQ95_02921Not AvailableNegative3830401 - 383138736145.1
thymidylate kinaseALQ95_02922Not AvailableNegative3831380 - 383201222982.5
hypothetical proteinALQ95_02923Not AvailableNegative3832032 - 383315941429.5
4-amino-4-deoxychorismate lyaseALQ95_02924Not AvailableNegative3833163 - 383397829536.8
3-oxoacyl- synthase 2ALQ95_02925Not AvailableNegative3833978 - 383522243230.4
acyl carrier proteinALQ95_02926Not AvailableNegative3835337 - 38355738613.97
3-ketoacyl- reductaseALQ95_02927Not AvailableNegative3835765 - 383650825823.1
malonyl coa-acyl carrier protein transacylaseALQ95_02928Not AvailableNegative3836524 - 383746232589.0

Displaying genes 3481 – 3490 of 5529 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.