Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain DSM 5025 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, indicating that it derives its energy from organic compounds, and it requires aerobic conditions for growth, reflecting its dependence on oxygen. Pseudomonas syringae pv. atrofaciens is known to inhabit various environments, showcasing its ecological versatility. The ability to thrive in multiple habitats may contribute to its adaptability, allowing it to exploit diverse organic substrates and survive in fluctuating environmental conditions. Research into the physiological traits of this strain could provide insights into its role in the ecosystem, particularly in soil and plant-associated environments, where such bacteria may participate in nutrient cycling and influence plant health. The ecological significance of Pseudomonas syringae pv. atrofaciens lies in its potential interactions with other microorganisms and its contributions to the dynamics of microbial communities in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain DSM 5025
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain DSM 5025

Accession NumberRBNQ00000000.1

Gene Summary

Adenine Count

1188733 bp

Thymine Count

1197530 bp

Guanine Count

1739084 bp

Cytosine Count

1722984 bp

Genome Length

5860345 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Major capsid proteinALQ96_01668Not Available-1483856 - 148487837323.0
Gpo family capsid scaffolding proteinALQ96_01669Not Available-1484880 - 148580333160.3
Putative terminase atpase subunitALQ96_01670Not Available+1485965 - 148801977585.5
Portal proteinALQ96_01671Not Available+1488054 - 148879727857.0
Hypothetical proteinALQ96_01672Not Available+1488874 - 14891349965.12
Dna-binding proteinALQ96_01673Not Available+1489880 - 14900927591.06
Hypothetical proteinALQ96_01674Not Available+1490122 - 149059817033.3
prophage psssm-01, orf32ALQ96_01675Not Available+1490595 - 149093912743.1
prophage psssm-01, orf33ALQ96_01676Not Available+1491014 - 14912568770.69
Toprim domain-containing proteinALQ96_01677Not Available+1491253 - 1494036105814.0

Displaying genes 61 – 70 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites