Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain DSM 5025 is a Gram-negative, rod-shaped bacterium that typically exists as single cells. This strain is classified as a heterotroph, indicating that it derives its energy from organic compounds, and it requires aerobic conditions for growth, reflecting its dependence on oxygen. Pseudomonas syringae pv. atrofaciens is known to inhabit various environments, showcasing its ecological versatility. The ability to thrive in multiple habitats may contribute to its adaptability, allowing it to exploit diverse organic substrates and survive in fluctuating environmental conditions. Research into the physiological traits of this strain could provide insights into its role in the ecosystem, particularly in soil and plant-associated environments, where such bacteria may participate in nutrient cycling and influence plant health. The ecological significance of Pseudomonas syringae pv. atrofaciens lies in its potential interactions with other microorganisms and its contributions to the dynamics of microbial communities in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain DSM 5025
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain DSM 5025

Accession NumberRBNQ00000000.1

Gene Summary

Adenine Count

1188733 bp

Thymine Count

1197530 bp

Guanine Count

1739084 bp

Cytosine Count

1722984 bp

Genome Length

5860345 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
EndolysinALQ96_01659Not Available-1478583 - 147911018469.2
prophage psssm-01, orf15ALQ96_01660Not Available-1479107 - 14793137391.12
Dksa/trar family c4-type zinc finger proteinALQ96_100281Not Available-1479313 - 14795227559.14
Putative tail tube proteinALQ96_01661Not Available-1479522 - 147997415859.8
Putative tail sheath proteinALQ96_01662Not Available-1479978 - 148109039127.0
Virion morphogenesis family proteinALQ96_01663Not Available-1481105 - 148177325148.4
Putative tail proteinALQ96_01664Not Available-1481763 - 148220616553.5
Putative head completion/stabilization proteinALQ96_01665Not Available-1482203 - 148266416930.1
prophage psssm-01, orf22ALQ96_01666Not Available+1482700 - 148299611214.8
Putative terminase endonuclease subunitALQ96_01667Not Available-1483137 - 148385927094.2

Displaying genes 51 – 60 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites