Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase, clpv1 family | ALQ96_01400 | Not Available | Positive | 5254953 - 5257556 | 95158.1 |
| type vi secretion system lipoprotein vasd | ALQ96_01401 | Not Available | Positive | 5257582 - 5258337 | 27531.6 |
| type vi secretion system protein impj-1/vase-1 | ALQ96_01402 | Not Available | Positive | 5258334 - 5259677 | 50318.3 |
| type vi secretion system protein impk | ALQ96_01403 | Not Available | Positive | 5259674 - 5260387 | 26785.4 |
| type vi secretion system protein, icmf family | ALQ96_01404 | Not Available | Positive | 5260418 - 5264344 | 145354.0 |
| type vi secretion system protein impm | ALQ96_01405 | Not Available | Positive | 5264376 - 5265299 | 34705.4 |
| type vi secretion system protein icmf | ALQ96_01406 | Not Available | Positive | 5265296 - 5267788 | 94255.9 |
| putative type vi secretion system effector, hcp1 family | ALQ96_01407 | Not Available | Positive | 5267923 - 5268462 | 19146.4 |
| type vi secretion system protein impa-1 | ALQ96_01408 | Not Available | Positive | 5268555 - 5269649 | 39976.1 |
| putative membrane protein | ALQ96_01409 | Not Available | Positive | 5269827 - 5270252 | 16191.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









