Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase, gamma subunit | ALQ96_01770 | Not Available | Negative | 204851 - 205423 | 20583.3 |
| sarcosine oxidase, alpha subunit | ALQ96_04830 | Not Available | Negative | 205427 - 208477 | 111566.0 |
| sarcosine oxidase, delta subunit | ALQ96_01772 | Not Available | Negative | 208330 - 208635 | 11678.6 |
| sarcosine oxidase, beta subunit | ALQ96_01773 | Not Available | Negative | 208649 - 209890 | 45241.4 |
| bifunctional protein fold | ALQ96_01774 | Not Available | Negative | 209872 - 210774 | 31625.2 |
| formyltetrahydrofolate deformylase | ALQ96_01775 | Not Available | Negative | 210771 - 211637 | 32699.3 |
| hypothetical protein | ALQ96_01776 | Not Available | Negative | 211929 - 212384 | 16445.5 |
| transcriptional regulator, hxlr family | ALQ96_101848 | Not Available | Positive | 212824 - 213111 | 10598.7 |
| hypothetical protein | ALQ96_01777 | Not Available | Negative | 213136 - 213351 | 7554.91 |
| hypothetical protein | ALQ96_04831 | Not Available | Positive | 213577 - 215067 | 54425.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









