Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein vasd-2 | ALQ96_00627 | Not Available | Positive | 4177154 - 4177663 | 18901.9 |
| type vi secretion system protein impj-2/vase-2 | ALQ96_00628 | Not Available | Positive | 4177660 - 4178991 | 49741.6 |
| hypothetical protein | ALQ96_00629 | Not Available | Positive | 4178997 - 4179860 | 32184.3 |
| icmf-related protein | ALQ96_100746 | Not Available | Positive | 4179862 - 4183377 | 132865.0 |
| acetyltransferase | ALQ96_00630 | Not Available | Positive | 4183419 - 4183553 | 5112.05 |
| putative metallophosphatase | ALQ96_00631 | Not Available | Negative | 4183727 - 4184185 | 16407.8 |
| zinc-dependent alcohol dehydrogenase-like protein | ALQ96_00632 | Not Available | Negative | 4184309 - 4185325 | 35974.1 |
| lysr family transcriptional regulator | ALQ96_00633 | Not Available | Positive | 4185457 - 4186407 | 34911.0 |
| s ii trna amino-acyl synthetase-like catalytic core domain protein | ALQ96_00634 | Not Available | Negative | 4186466 - 4187044 | 21050.2 |
| gnat family acetyltransferase | ALQ96_04522 | Not Available | Negative | 4187334 - 4187936 | 22224.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









