Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pily-1 | ALQ96_02416 | Not Available | Positive | 4126419 - 4129622 | 113376.0 |
| type iv pilus assembly protein pile | ALQ96_02417 | Not Available | Positive | 4129634 - 4130041 | 14448.4 |
| putative glycine oxidase thio | ALQ96_02418 | Not Available | Positive | 4130067 - 4131170 | 39486.6 |
| type iv pilus expression regulatory protein pilr | ALQ96_04979 | Not Available | Negative | 4131297 - 4132733 | 53282.9 |
| type iv pili regulatory two-component sensor pils | ALQ96_02420 | Not Available | Negative | 4132637 - 4134229 | 57990.5 |
| hypothetical protein | ALQ96_02421 | Not Available | Negative | 4134219 - 4134458 | 8961.08 |
| outer membrane protein assembly factor bamd | ALQ96_02422 | Not Available | Negative | 4134578 - 4135600 | 38269.8 |
| pseudouridine synthase | ALQ96_02423 | Not Available | Positive | 4135750 - 4136712 | 35537.0 |
| atp-dependent clp protease, atp-binding subunit clpb | ALQ96_02424 | Not Available | Positive | 4137609 - 4140173 | 95189.8 |
| Trna-asn | Not Available | Not Available | Positive | 4140467 - 4140542 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









