Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyoverdine biosynthesis-related protein pvdp | ALQ96_04139 | Not Available | Positive | 3439202 - 3440836 | 62399.7 |
| pyoverdine rnd-type efflux system, outer membrane protein ompq | ALQ96_05404 | Not Available | Negative | 3441098 - 3442534 | 52429.9 |
| macrolide export atp-binding/permease protein macb | ALQ96_04141 | Not Available | Negative | 3442494 - 3444464 | 69650.1 |
| pyoverdine rnd-type efflux system, mfp subunit pvdr | ALQ96_04142 | Not Available | Negative | 3444465 - 3445637 | 41941.1 |
| 3-oxo-c12-homoserine lactone acylase pvdq | ALQ96_04143 | Not Available | Positive | 3445830 - 3448163 | 84707.0 |
| hypothetical protein | ALQ96_04144 | Not Available | Negative | 3448216 - 3448527 | 10958.0 |
| aspartate/tyrosine/aromatic amino acid aminotransferase | ALQ96_04145 | Not Available | Negative | 3448750 - 3449946 | 43321.9 |
| uvrabc system protein b | ALQ96_04146 | Not Available | Positive | 3450348 - 3452363 | 76361.3 |
| putative exonuclease, dna ligase-associated | ALQ96_03700 | Not Available | Positive | 3452703 - 3453749 | 38237.0 |
| atp-dependent dna ligase | ALQ96_03701 | Not Available | Positive | 3453746 - 3455449 | 63627.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









