Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain DSM 5025 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and heterotrophic energy source. This strain is capable of mobility, facilitated by the presence of flagella, and typically exists as single cells rather than in clusters. It thrives within a mesophilic temperature range, indicating its preference for moderate temperatures that are commonly found in various environments. The bacterium is free-living, suggesting it does not require a host for survival and can adapt to multiple habitats. With a single replicon and a double membrane structure, Pseudomonas syringae pv. atrofaciens strain DSM 5025 exhibits typical features of the Pseudomonas genus, which is known for its metabolic versatility and ecological significance. The ability of this strain to exist in diverse environments while being a heterotroph indicates its ecological role in nutrient cycling. It likely participates in the decomposition of organic matter, contributing to soil health and plant interactions. Understanding the traits of Pseudomonas syringae pv. atrofaciens strain DSM 5025 can provide insights into its potential applications in agriculture and environmental management, particularly in the context of plant health and disease resistance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. atrofaciens strain DSM 5025

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain DSM 5025
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gene Summary

Adenine Count

1188733 bp

Thymine Count

1197530 bp

Guanine Count

1739084 bp

Cytosine Count

1722984 bp

Genome Length

5860345 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic phosphate-binding protein / peptidoglycan-binding domain fusion proteinALQ96_00771Not AvailableNegative2110743 - 211209848451.0
exodeoxyribonuclease iiiALQ96_04556Not AvailableNegative2112233 - 211314434817.2
gnat family acetyltransferaseALQ96_04557Not AvailablePositive2113130 - 211390929358.5
hypothetical proteinALQ96_00774Not AvailablePositive2113924 - 211569364891.8
hypothetical proteinALQ96_00775Not AvailablePositive2115690 - 2119379131260.0
lysr family transcriptional regulatorALQ96_00776Not AvailablePositive2119487 - 212041634151.6
putative thiol peroxidaseALQ96_00777Not AvailablePositive2120507 - 212100717295.5
cation/multidrug rnd-type efflux system, membrane fusion proteinALQ96_00778Not AvailablePositive2121175 - 212246446156.4
cation/multidrug rnd-type efflux system, acrb/acrd/acrf family plasma membrane proteinALQ96_00779Not AvailablePositive2122461 - 2125571112041.0
cation/multidrug rnd-type efflux system, acrb/acrd/acrf family plasma membrane proteinALQ96_00780Not AvailablePositive2125568 - 2128675112436.0

Displaying genes 1901 – 1910 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.