Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas syringae |
| Strain | pv. atrofaciens strain DSM 5025 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Heterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1188733 bp
Thymine Count
1197530 bp
Guanine Count
1739084 bp
Cytosine Count
1722984 bp
Genome Length
5860345 bp
Protein-coding Genes
4894 genes
Non-Coding Genes
191 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane porin, oprd family | ALQ96_00462 | Not Available | Positive | 1726591 - 1727859 | 46434.4 |
| nucleoside-diphosphate-sugar epimerase | ALQ96_00463 | Not Available | Positive | 1728039 - 1728866 | 30585.0 |
| gluconolactonase | ALQ96_00464 | Not Available | Positive | 1728909 - 1729793 | 32118.9 |
| trap-type c4-dicarboxylate transport system, periplasmic protein | ALQ96_00465 | Not Available | Positive | 1729851 - 1730876 | 37661.6 |
| trap-type c4-dicarboxylate transport system, small permease protein | ALQ96_00466 | Not Available | Positive | 1730931 - 1731467 | 19585.8 |
| trap-type c4-dicarboxylate transport system, large permease protein | ALQ96_00467 | Not Available | Positive | 1731468 - 1732748 | 45166.8 |
| drug/metabolite transporter superfamily permease | ALQ96_00468 | Not Available | Positive | 1732833 - 1733804 | 34299.9 |
| aldose 1-epimerase | ALQ96_00469 | Not Available | Positive | 1733779 - 1734660 | 32415.3 |
| vapb/fita-like antitoxin protein of type ii toxin-antitoxin system | ALQ96_00470 | Not Available | Positive | 1734772 - 1735002 | 8550.04 |
| ribonuclease vapc | ALQ96_00471 | Not Available | Positive | 1735002 - 1735406 | 15075.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.









