Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas syringae pv. atrofaciens strain DSM 5025 is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and heterotrophic energy source. This strain is capable of mobility, facilitated by the presence of flagella, and typically exists as single cells rather than in clusters. It thrives within a mesophilic temperature range, indicating its preference for moderate temperatures that are commonly found in various environments. The bacterium is free-living, suggesting it does not require a host for survival and can adapt to multiple habitats. With a single replicon and a double membrane structure, Pseudomonas syringae pv. atrofaciens strain DSM 5025 exhibits typical features of the Pseudomonas genus, which is known for its metabolic versatility and ecological significance. The ability of this strain to exist in diverse environments while being a heterotroph indicates its ecological role in nutrient cycling. It likely participates in the decomposition of organic matter, contributing to soil health and plant interactions. Understanding the traits of Pseudomonas syringae pv. atrofaciens strain DSM 5025 can provide insights into its potential applications in agriculture and environmental management, particularly in the context of plant health and disease resistance.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas syringae
Strainpv. atrofaciens strain DSM 5025

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas syringae pv. atrofaciens strain DSM 5025
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Pseudomonas syringae pv. atrofaciens strain DSM 5025

Gene Summary

Adenine Count

1188733 bp

Thymine Count

1197530 bp

Guanine Count

1739084 bp

Cytosine Count

1722984 bp

Genome Length

5860345 bp

Protein-coding Genes

4894 genes

Non-Coding Genes

191 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetyltransferase, gnat familyALQ96_04625Not AvailableNegative1113817 - 111429918347.0
abc-type amino acid transport system, periplasmic substrate-binding proteinALQ96_04626Not AvailablePositive1114504 - 111524427748.4
membrane proteinALQ96_100183Not AvailableNegative1115222 - 111742081188.2
flavoprotein, familyALQ96_01015Not AvailableNegative1117558 - 111873642746.3
hypothetical proteinALQ96_102266Not AvailablePositive1118635 - 11188598099.26
atp-dependent 23s rrna helicase dbpaALQ96_04628Not AvailableNegative1119018 - 112055055889.1
dihydrolipoamide acetyltransferase, e2 component of pyruvate dehydrogenase complexALQ96_01017Not AvailableNegative1120714 - 112235156239.0
pyruvate dehydrogenase subunit e1ALQ96_04629Not AvailableNegative1122494 - 1125331106024.0
bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferaseALQ96_04633Not AvailablePositive1125524 - 1128481110449.0
hypothetical proteinALQ96_100878Not AvailableNegative1128524 - 11286946487.72

Displaying genes 1171 – 1180 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.