Otariodibacter oris strain DSM 23800

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Otariodibacter

Description

Otariodibacter oris strain DSM 23800 is a Gram-negative bacterium characterized by its rod shape and non-motile nature. This strain has been classified with a single replicon, indicating a relatively simple genomic structure. The genomic data for this strain can be accessed under the accession number RBJC00000000.1. As a member of the microbial community, Otariodibacter oris may play a role in the ecological dynamics of its environment, potentially influencing nutrient cycling and interactions with other microorganisms. While specific ecological functions are not detailed here, the presence of Gram-negative bacteria like Otariodibacter oris is often associated with various metabolic capabilities that can contribute to the health of ecosystems, particularly in aquatic environments where such strains are commonly found. Understanding the traits of Otariodibacter oris can aid in appreciating its biological significance and potential applications in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusOtariodibacter
SpeciesOtariodibacter oris
Strainstrain DSM 23800

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Otariodibacter oris strain DSM 23800 Ga0244548_109, whole genome

Gene Summary

Adenine Count

637942 bp

Thymine Count

636732 bp

Guanine Count

359807 bp

Cytosine Count

361749 bp

Genome Length

1998458 bp

Protein-coding Genes

1803 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphoheptose isomeraseDES31_0570Not AvailableNegative586272 - 58685021245.6
ribosome recycling factorDES31_0571Not AvailablePositive587007 - 58756420795.0
trna(adenine34) deaminaseDES31_0572Not AvailableNegative587633 - 58814819089.3
atp-dependent rna helicase csdaDES31_0573Not AvailableNegative588222 - 59003668010.9
lipoprotein nlpiDES31_0574Not AvailableNegative590226 - 59114635745.8
polyribonucleotide nucleotidyltransferaseDES31_0575Not AvailableNegative591198 - 59333377249.9
oligopeptide transport system substrate-binding proteinDES31_0576Not AvailablePositive593684 - 59534863181.6
trna threonylcarbamoyladenosine biosynthesis protein tsabDES31_0577Not AvailableNegative595409 - 59610125143.5
3-deoxy-d-arabinoheptulosonate-7-phosphate synthaseDES31_0578Not AvailableNegative596115 - 59718239145.9
hypothetical proteinDES31_0579Not AvailableNegative597243 - 59808231107.7

Displaying genes 561 – 570 of 1912 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.