Otariodibacter oris strain DSM 23800

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Otariodibacter

Description

Otariodibacter oris strain DSM 23800 is a Gram-negative bacterium characterized by its rod shape and non-motile nature. This strain has been classified with a single replicon, indicating a relatively simple genomic structure. The genomic data for this strain can be accessed under the accession number RBJC00000000.1. As a member of the microbial community, Otariodibacter oris may play a role in the ecological dynamics of its environment, potentially influencing nutrient cycling and interactions with other microorganisms. While specific ecological functions are not detailed here, the presence of Gram-negative bacteria like Otariodibacter oris is often associated with various metabolic capabilities that can contribute to the health of ecosystems, particularly in aquatic environments where such strains are commonly found. Understanding the traits of Otariodibacter oris can aid in appreciating its biological significance and potential applications in microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusOtariodibacter
SpeciesOtariodibacter oris
Strainstrain DSM 23800

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Otariodibacter oris strain DSM 23800 Ga0244548_109, whole genome

Gene Summary

Adenine Count

637942 bp

Thymine Count

636732 bp

Guanine Count

359807 bp

Cytosine Count

361749 bp

Genome Length

1998458 bp

Protein-coding Genes

1803 genes

Non-Coding Genes

112 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-acetylmuramic acid 6-phosphate etheraseDES31_0040Not AvailablePositive46441 - 4734932280.4
trna (cytidine32/uridine32-2'-o)-methyltransferaseDES31_0041Not AvailableNegative47369 - 4808526756.4
iron(iii) transport system substrate-binding proteinDES31_0042Not AvailablePositive48215 - 4924938151.6
deor family transcriptional regulatorDES31_0043Not AvailablePositive49447 - 5020828077.7
galactosamine 6-phosphate isomerase agasDES31_0044Not AvailablePositive50290 - 5142341597.6
pts system mannose-specific iib componentDES31_0045Not AvailablePositive51441 - 5191417264.2
pts system mannose-specific iic componentDES31_0046Not AvailablePositive51928 - 5282131318.6
pts system iid component (man family)DES31_0047Not AvailablePositive52808 - 5364430348.9
had superfamily hydrolase (tigr01509 family)/had superfamily hydrolase (tigr01549 family)DES31_0048Not AvailablePositive53781 - 5444925151.2
beta-galactosidaseDES31_0049Not AvailablePositive54474 - 5626468738.6

Displaying genes 101 – 110 of 1912 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.